Package: PEPBVS 2.2

PEPBVS: Bayesian Variable Selection using Power-Expected-Posterior Prior

Performs Bayesian variable selection under normal linear models for the data with the model parameters following as prior distributions either the power-expected-posterior (PEP) or the intrinsic (a special case of the former) (Fouskakis and Ntzoufras (2022) <doi:10.1214/21-BA1288>, Fouskakis and Ntzoufras (2020) <doi:10.3390/econometrics8020017>). The prior distribution on model space is the uniform over all models or the uniform on model dimension (a special case of the beta-binomial prior). The selection is performed by either implementing a full enumeration and evaluation of all possible models or using the Markov Chain Monte Carlo Model Composition (MC3) algorithm (Madigan and York (1995) <doi:10.2307/1403615>). Complementary functions for hypothesis testing, estimation and predictions under Bayesian model averaging, as well as, plotting and printing the results are also provided. The results can be compared to the ones obtained under other well-known priors on model parameters and model spaces.

Authors:Konstantina Charmpi [aut, cre], Dimitris Fouskakis [aut], Ioannis Ntzoufras [aut]

PEPBVS_2.2.tar.gz
PEPBVS_2.2.zip(r-4.7)PEPBVS_2.2.zip(r-4.6)PEPBVS_2.2.zip(r-4.5)
PEPBVS_2.2.tgz(r-4.6-x86_64)PEPBVS_2.2.tgz(r-4.6-arm64)PEPBVS_2.2.tgz(r-4.5-x86_64)PEPBVS_2.2.tgz(r-4.5-arm64)
PEPBVS_2.2.tar.gz(r-4.7-arm64)PEPBVS_2.2.tar.gz(r-4.7-x86_64)PEPBVS_2.2.tar.gz(r-4.6-arm64)PEPBVS_2.2.tar.gz(r-4.6-x86_64)
PEPBVS_2.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html
DESCRIPTION |NEWS
card.svg |card.png
PEPBVS/json (API)

# Install 'PEPBVS' in R:
install.packages('PEPBVS', repos = c('https://kcharmpi.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/kcharmpi/pepbvs/issues

Uses libs:
  • gsl– GNU Scientific Library (GSL)
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
Datasets:

On CRAN:

Conda:

gslopenblascpp

2.00 score 279 downloads 7 exports 36 dependencies

Last updated from:d28a37ccc4. Checks:13 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK160
linux-devel-x86_64OK157
source / vignettesOK164
linux-release-arm64OK159
linux-release-x86_64OK153
macos-release-arm64OK198
macos-release-x86_64OK431
macos-oldrel-arm64OK191
macos-oldrel-x86_64OK390
windows-develOK148
windows-releaseOK158
windows-oldrelOK156
wasm-releaseOK146

Exports:comparepriors.lmestimation.pepfull_enumeration_pepmc3_peppep.lmpeptestposteriorpredictive.pep

Dependencies:BASBayesVarSelbriocallrclicrayondescdiffobjellipseevaluatefftwtoolsfsgluejsonlitelatticelifecyclemagrittrMASSMatrixmcmcsemvtnormotelpkgbuildpkgloadpraiseprocessxpsR6RcppRcppArmadilloRcppGSLrlangrprojroottestthatwaldowithr